arcade_collection.input#

Tasks for generating input files for ARCADE.

input.convert_to_cells_file

Convert all samples to cell objects.

input.convert_to_locations_file

Convert all samples to location objects.

input.generate_setup_file

Create ARCADE setup file from samples, margins, and CPM Hamiltonian terms.

input.group_template_conditions

Create conditions groups obeying specified max seeds for each group.

input.merge_region_samples

Merge different region samples into single valid samples dataframe.